- Predicted Gene MLOC_68494
MLOC_68494 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 8.20618 | 20.4829 | 16.3995 | 15.9967 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 14.6486 | 12.181 | 11.937 | 10.8019 |
| INF1 | Young developing inflorescences (5mm) | 21.8685 | 21.2947 | 19.637 | 17.3927 |
| INF2 | Developing inflorescences (1-1.5 cm) | 18.6565 | 20.6035 | 14.7617 | 20.2278 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 9.16306 | 11.6136 | 8.22783 | 12.7051 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.08991 | 5.63234 | 6.95804 | 19.6085 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.0289 | 14.3444 | 14.2334 | 13.917 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.95776 | 3.47028 | 3.04696 | 7.44194 |
CDS Structure of MLOC_68494
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_68494.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g10244.1 |
-2 |
0.0 |
850 |
409/484 (85%) |
13110.m00919 protein alanyl-tRNA synthetase, putative, expressed |
| TAIR PP10 |
AT1G50200.1 |
-2 |
0.0 |
729 |
350/482 (73%) |
| Symbols: ALATS, ACD | Alanyl-tRNA synthetase | chr1:18591429-18598311 REVERSE LENGTH=1003 |