- Predicted Gene MLOC_68482
MLOC_68482 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 18.2012 | 44.086 | 39.3625 | 38.5246 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 46.0487 | 48.9034 | 40.6339 | 41.5336 |
| INF1 | Young developing inflorescences (5mm) | 53.7468 | 53.9671 | 53.1223 | 45.5284 |
| INF2 | Developing inflorescences (1-1.5 cm) | 72.8656 | 69.5162 | 62.2776 | 77.1838 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 18.195 | 39.8169 | 26.987 | 47.754 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 26.6475 | 30.4395 | 24.3837 | 105.99 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 69.7863 | 62.8542 | 71.9639 | 68.2482 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 52.911 | 48.6255 | 49.6941 | 114.866 |
CDS Structure of MLOC_68482
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_68482.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g01960.1 |
+1 |
0.0 |
1817 |
1027/1354 (76%) |
13101.m00126 protein transcriptional repressor, putative, expressed |
| TAIR PP10 |
AT3G01320.1 |
+1 |
0.0 |
1028 |
650/1413 (46%) |
| Symbols: SNL1 | SIN3-like 1 | chr3:106730-113197 FORWARD LENGTH=1372 |