MLOC_68437 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.01755520.016389200.0187384
LEAShoots from the seedlings (10 cm shoot stage)10.77939.816622.216815.2533
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.0125098000.0149783
ROORoots from the seedlings (10 cm shoot stage)0.1859030.2723940.1718450.236001
NODDeveloping tillers at six leaf stage, 3rd internode000.01804480.0279542
CAR5Developing grain, bracts removed (5 DPA)0.015862300.01811260.0239929
CAR15Developing grain, bracts removed (15 DPA)0.036588100.02671650.0694868



CDS Structure of MLOC_68437






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68437.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68437.1CUST_15253_PI427708080AvailableAvailablecontig_54783 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g04070.1 -1 0.0 1006 627/1210 (52%) 13101.m00360 protein verticillium wilt disease resistance protein, putative, expressed
TAIR PP10 AT5G27060.1 -1 4e-106 362 276/803 (34%) | Symbols: AtRLP53, RLP53 | receptor like protein 53 | chr5:9522534-9525407 REVERSE LENGTH=957