- Predicted Gene MLOC_68418
MLOC_68418 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_68418_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_68418_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.353048 | 1.3071 | 0.69283 | 1.00384 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.64934 | 1.30188 | 1.97864 | 2.26927 |
INF1 | Young developing inflorescences (5mm) | 4.8727 | 6.59415 | 5.90077 | 4.97326 |
INF2 | Developing inflorescences (1-1.5 cm) | 12.0304 | 8.36496 | 9.1926 | 10.8731 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.336458 | 1.03258 | 0.64188 | 1.27218 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.993099 | 1.70845 | 1.68574 | 6.45479 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.63473 | 4.52548 | 5.06891 | 5.05557 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.43081 | 1.81067 | 1.98042 | 3.78628 |
CDS Structure of MLOC_68418
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_68418.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g36470.1 |
+3 |
3e-167 |
496 |
282/314 (90%) |
13111.m03573 protein ubiquitin carboxyl-terminal hydrolase 21, putative, expressed |
TAIR PP10 |
AT5G06600.3 |
+3 |
9e-135 |
412 |
239/313 (76%) |
| Symbols: UBP12 | ubiquitin-specific protease 12 | chr5:2020682-2027834 REVERSE LENGTH=985 |