- Predicted Gene MLOC_68417
MLOC_68417 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.1215 | 0.555101 | 0.0446693 | 0.569954 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.103409 | 0.0626529 | 0.191791 | 0.104076 |
| INF1 | Young developing inflorescences (5mm) | 0.0743169 | 0.089795 | 0.063153 | 0.0761187 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0548216 | 0.0262346 | 0.348233 | 0.159256 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.12366 | 2.2625 | 1.4635 | 2.64919 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.126325 | 0.207037 | 0.588769 | 0.901387 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.485873 | 0.526152 | 0.727644 | 0.697163 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.75613 | 2.20366 | 1.93404 | 6.56455 |
CDS Structure of MLOC_68417
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_68417.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g13800.1 |
-2 |
2e-78 |
249 |
142/214 (66%) |
13102.m01534 protein HSF-type DNA-binding domain containing protein, expressed |
| TAIR PP10 |
AT3G24520.1 |
-2 |
2e-54 |
186 |
100/199 (50%) |
| Symbols: AT-HSFC1, HSFC1 | heat shock transcription factor C1 | chr3:8941455-8942531 FORWARD LENGTH=330 |