MLOC_68405 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.8288114.373310.18138.66979
LEAShoots from the seedlings (10 cm shoot stage)14.115711.009710.92869.4109
INF1Young developing inflorescences (5mm)30.513327.949426.112921.6482
INF2Developing inflorescences (1-1.5 cm)30.969229.943523.853729.0405
ROORoots from the seedlings (10 cm shoot stage)4.360258.420087.1598.0064
NODDeveloping tillers at six leaf stage, 3rd internode4.63316.300925.8518818.596
CAR5Developing grain, bracts removed (5 DPA)18.81615.503217.297115.0148
CAR15Developing grain, bracts removed (15 DPA)15.879313.726614.970931.3832



CDS Structure of MLOC_68405






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68405.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68405.1CUST_15247_PI427708080AvailableAvailablecontig_54737 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g68810.1 -2 0.0 1019 519/622 (83%) 13101.m07501 protein expressed protein
TAIR PP10 AT1G24706.1 -2 0.0 722 372/611 (61%) | Symbols: THO2, AtTHO2 | THO2 | chr1:8742210-8755243 FORWARD LENGTH=1804