MLOC_68356 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.819153.490343.669683.51304
LEAShoots from the seedlings (10 cm shoot stage)4.353013.20513.943593.444
INF1Young developing inflorescences (5mm)6.100546.42716.254445.25809
INF2Developing inflorescences (1-1.5 cm)9.683428.013598.556469.36122
ROORoots from the seedlings (10 cm shoot stage)7.526796.443467.35958.24675
NODDeveloping tillers at six leaf stage, 3rd internode5.875977.72098.5933229.5711
CAR5Developing grain, bracts removed (5 DPA)6.919867.955736.594266.98717
CAR15Developing grain, bracts removed (15 DPA)5.75625.372086.5207912.9673



CDS Structure of MLOC_68356






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68356.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68356.1CUST_15236_PI427708080AvailableAvailablecontig_54636 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g03760.2 +2 4e-111 337 181/305 (59%) 13102.m00370 protein expressed protein
TAIR PP10 AT1G60610.3 +2 3e-52 182 118/310 (38%) SBP (S-ribonuclease binding protein) family protein | chr1:22327999-22329186 REVERSE LENGTH=340