MLOC_68328 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.884854.880166.622343.09274
LEAShoots from the seedlings (10 cm shoot stage)13.933513.758917.82897.85006
INF1Young developing inflorescences (5mm)5.64165.244015.843672.67287
INF2Developing inflorescences (1-1.5 cm)4.810754.746115.556733.52295
ROORoots from the seedlings (10 cm shoot stage)6.905619.0268811.05896.06818
NODDeveloping tillers at six leaf stage, 3rd internode10.91357.6030810.603517.3648
CAR5Developing grain, bracts removed (5 DPA)3.80514.321895.432862.52993
CAR15Developing grain, bracts removed (15 DPA)2.787534.18844.785794.43932



CDS Structure of MLOC_68328






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68328.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68328.3CUST_13035_PI427708083AvailableAvailablecontig_54599 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g29510.4 +3 1e-48 164 82/105 (78%) 13102.m03214 protein DUF803 domain containing, putative, expressed
TAIR PP10 AT3G23870.1 +3 1e-28 112 59/119 (50%) Protein of unknown function (DUF803) | chr3:8620253-8621755 FORWARD LENGTH=335