MLOC_68318 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains87.7827100.5894.623697.1567
LEAShoots from the seedlings (10 cm shoot stage)81.19378.799518.829932.9441
INF1Young developing inflorescences (5mm)116.33599.335797.557588.1377
INF2Developing inflorescences (1-1.5 cm)50.973863.322858.576363.451
ROORoots from the seedlings (10 cm shoot stage)17.099341.211542.201246.1375
NODDeveloping tillers at six leaf stage, 3rd internode11.22967.221273.7782124.2867
CAR5Developing grain, bracts removed (5 DPA)89.972889.715991.566388.3061
CAR15Developing grain, bracts removed (15 DPA)13.283112.174414.862529.426



CDS Structure of MLOC_68318






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68318.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251851.1NoneNoneNoneNone
MLOC_68318.1CUST_5624_PI427708080AvailableAvailablecontig_54586 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g10600.1 -3 0.0 628 332/370 (90%) 13109.m00932 protein enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed
TAIR PP10 AT2G05990.2 -3 6e-174 501 277/382 (73%) | Symbols: MOD1, ENR1 | NAD(P)-binding Rossmann-fold superfamily protein | chr2:2322876-2324867 FORWARD LENGTH=390