MLOC_68302 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1353590.09634990.2477420.1395
LEAShoots from the seedlings (10 cm shoot stage)0.14668300.05597910.0867731
INF1Young developing inflorescences (5mm)0.3091260.557940.8797610.496623
INF2Developing inflorescences (1-1.5 cm)0.4666560.09909570.09128930.250786
ROORoots from the seedlings (10 cm shoot stage)0.06694210.0767300.104668
NODDeveloping tillers at six leaf stage, 3rd internode0.2982690.1081740.01589530.207482
CAR5Developing grain, bracts removed (5 DPA)2.478413.69912.428022.71285
CAR15Developing grain, bracts removed (15 DPA)3.490533.005942.986177.80346



CDS Structure of MLOC_68302






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68302.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68302.1CUST_15230_PI427708080AvailableAvailablecontig_54555 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g48300.1 +2 2e-124 376 267/352 (76%) 13105.m05132 protein purine permease, putative, expressed
TAIR PP10 AT1G30840.2 +2 2e-58 202 152/345 (44%) | Symbols: PUP4 | purine permease 4 | chr1:10974581-10975729 FORWARD LENGTH=382