MLOC_68295 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.227131.225050.9652941.25501
LEAShoots from the seedlings (10 cm shoot stage)0.8198841.4551.610641.14529
INF1Young developing inflorescences (5mm)0.1623690.1827170.2811280.210091
INF2Developing inflorescences (1-1.5 cm)0.09546810.1527280.2437190.204305
ROORoots from the seedlings (10 cm shoot stage)17.551415.363112.077818.1536
NODDeveloping tillers at six leaf stage, 3rd internode0.1382570.1934590.4817670.801043
CAR5Developing grain, bracts removed (5 DPA)1.411391.993491.988761.99605
CAR15Developing grain, bracts removed (15 DPA)0.2542340.07191610.2758570.498926



CDS Structure of MLOC_68295






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68295.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369166NoneNoneNoneNone
MLOC_68295.1CUST_5617_PI427708080AvailableAvailablecontig_54539 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g49710.1 -2 8e-123 359 169/221 (76%) 13101.m05171 protein glutathione S-transferase, putative, expressed
TAIR PP10 AT1G10360.1 -2 1e-69 221 103/216 (48%) | Symbols: ATGSTU18, GST29, GSTU18 | glutathione S-transferase TAU 18 | chr1:3395738-3396806 REVERSE LENGTH=227