MLOC_68293 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.042515.033314.114114.1016
LEAShoots from the seedlings (10 cm shoot stage)10.14699.351267.972647.61354
INF1Young developing inflorescences (5mm)17.988317.383517.906515.2329
INF2Developing inflorescences (1-1.5 cm)20.372119.848818.869521.856
ROORoots from the seedlings (10 cm shoot stage)8.5474313.221411.102314.5641
NODDeveloping tillers at six leaf stage, 3rd internode7.859245.95148.6404320.3229
CAR5Developing grain, bracts removed (5 DPA)19.712919.908719.373619.465
CAR15Developing grain, bracts removed (15 DPA)9.367158.851558.2636421.6932



CDS Structure of MLOC_68293






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68293.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362733NoneNoneNoneNone
MLOC_68293.1CUST_5616_PI427708080AvailableAvailablecontig_54537 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g45480.1 -2 0.0 575 300/358 (84%) 13102.m05099 protein nucleic acid binding protein, putative, expressed
TAIR PP10 AT5G51980.1 -2 1e-139 422 218/367 (59%) Transducin/WD40 repeat-like superfamily protein | chr5:21113650-21115902 REVERSE LENGTH=437