MLOC_68263 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.14802800.235196
LEAShoots from the seedlings (10 cm shoot stage)1.31662.123611.996821.30332
INF1Young developing inflorescences (5mm)0.4659660.4228510.9741320.460565
INF2Developing inflorescences (1-1.5 cm)0.9804960.6792520.9414730.844702
ROORoots from the seedlings (10 cm shoot stage)00.11175700.278338
NODDeveloping tillers at six leaf stage, 3rd internode1.090611.927411.749495.16065
CAR5Developing grain, bracts removed (5 DPA)1.452191.09540.8950321.02375
CAR15Developing grain, bracts removed (15 DPA)0.1310850.04734930.4438890.357126



CDS Structure of MLOC_68263






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68263.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68263.1CUST_9182_PI427708083AvailableAvailablecontig_54480 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g56070.1 -1 2e-41 97 43/61 (70%) 13104.m05826 protein COP9 signalosome complex subunit 5b, putative, expressed
TAIR PP10 AT1G71230.1 -1 9e-40 92 41/60 (68%) | Symbols: CSN5B, CSN5, AJH2 | COP9-signalosome 5B | chr1:26852560-26854255 FORWARD LENGTH=358