MLOC_68256 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.129912.194710.915811.5596
LEAShoots from the seedlings (10 cm shoot stage)11.27087.088498.560827.9712
INF1Young developing inflorescences (5mm)11.597812.669612.296710.1128
INF2Developing inflorescences (1-1.5 cm)12.754813.479111.572114.0946
ROORoots from the seedlings (10 cm shoot stage)4.932058.540766.954549.8622
NODDeveloping tillers at six leaf stage, 3rd internode13.384810.932511.004739.4658
CAR5Developing grain, bracts removed (5 DPA)8.906589.599069.038339.03127
CAR15Developing grain, bracts removed (15 DPA)3.271222.425343.047456.56836



CDS Structure of MLOC_68256






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68256.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371420NoneNoneNoneNone
MLOC_68256.4CUST_5610_PI427708080AvailableAvailablecontig_54471 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g32670.1 -1 0.0 902 500/661 (76%) 13107.m03312 protein expressed protein
TAIR PP10 AT5G55060.2 -1 9e-151 455 261/549 (48%) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58510.1). | chr5:22343079-22346400 FORWARD LENGTH=569