MLOC_68236 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.436711.690912.485312.8144
LEAShoots from the seedlings (10 cm shoot stage)9.514657.4781511.41068.09518
INF1Young developing inflorescences (5mm)40.774943.506944.505236.7792
INF2Developing inflorescences (1-1.5 cm)50.978234.928546.002648.2054
ROORoots from the seedlings (10 cm shoot stage)14.776413.325416.798716.4746
NODDeveloping tillers at six leaf stage, 3rd internode1.016451.371746.519127.63598
CAR5Developing grain, bracts removed (5 DPA)9.3280210.200410.710310.1247
CAR15Developing grain, bracts removed (15 DPA)6.176635.58666.4928214.2824



CDS Structure of MLOC_68236






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68236.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373340NoneNoneNoneNone
MLOC_68236.1CUST_5607_PI427708080AvailableAvailablecontig_54431 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g37870.1 -3 0.0 546 290/333 (87%) 13102.m04151 protein Brix domain containing protein, putative, expressed
TAIR PP10 AT1G52930.1 -3 5e-165 471 238/321 (74%) Ribosomal RNA processing Brix domain protein | chr1:19711261-19713103 FORWARD LENGTH=320