MLOC_68213 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.444813.406723.350733.63351
LEAShoots from the seedlings (10 cm shoot stage)18.991130.591738.619224.8556
INF1Young developing inflorescences (5mm)0.1360810.1616830.3728890.218135
INF2Developing inflorescences (1-1.5 cm)0.3136410.3376830.2098940.367861
ROORoots from the seedlings (10 cm shoot stage)9.892646.528117.030548.21598
NODDeveloping tillers at six leaf stage, 3rd internode22.766230.232232.834679.4278
CAR5Developing grain, bracts removed (5 DPA)16.142417.345315.93518.2818
CAR15Developing grain, bracts removed (15 DPA)4.745934.766854.3311812.7242



CDS Structure of MLOC_68213






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68213.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374345NoneNoneNoneNone
MLOC_68213.2CUST_5605_PI427708080AvailableAvailablecontig_54403 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g06020.1 -3 0.0 610 441/701 (63%) 13111.m00594 protein homeobox domain containing protein, expressed
TAIR PP10 AT2G35940.3 -3 4e-84 286 259/684 (38%) | Symbols: BLH1 | BEL1-like homeodomain 1 | chr2:15089171-15091699 REVERSE LENGTH=680