MLOC_6819 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 50.5892 | 33.3177 | 37.8341 | 42.9986 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 21.1293 | 19.7631 | 32.4226 | 21.1615 |
| INF1 | Young developing inflorescences (5mm) | 39.8832 | 45.3179 | 44.5561 | 42.0109 |
| INF2 | Developing inflorescences (1-1.5 cm) | 33.2997 | 34.3955 | 38.2714 | 44.9557 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 76.3864 | 54.201 | 61.7017 | 78.3095 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 44.6545 | 36.116 | 44.3521 | 128.157 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 38.8534 | 41.6255 | 41.7235 | 48.2106 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 16.4327 | 15.0286 | 16.7396 | 43.4203 |
CDS Structure of MLOC_6819
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6819.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 | None | - | - | - | - | - |
| TAIR PP10 |
AT5G63135.1 |
+2 |
1e-11 |
59 |
34/65 (52%) |
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:25325253-25326440 REVERSE LENGTH=99 |
