MLOC_6817 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1500960.379460.1120160.282823
LEAShoots from the seedlings (10 cm shoot stage)0.3639260.3660660.5241530.387502
INF1Young developing inflorescences (5mm)0.2080730.1331980.1757930.15792
INF2Developing inflorescences (1-1.5 cm)0.1499970.1405260.4031780.24778
ROORoots from the seedlings (10 cm shoot stage)0.07957070.2437810.05943960.270674
NODDeveloping tillers at six leaf stage, 3rd internode00.026829500.232535
CAR5Developing grain, bracts removed (5 DPA)0.2951390.3487040.2661350.33535
CAR15Developing grain, bracts removed (15 DPA)0.2153660.07854870.208480.401812



CDS Structure of MLOC_6817






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_6817.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_6817.1CUST_15211_PI427708080AvailableAvailablecontig_138141 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g03810.1 +2 0.0 1018 506/676 (75%) 13107.m00319 protein lectin-like receptor kinase 7, putative, expressed
TAIR PP10 AT2G37710.1 +2 0.0 680 348/648 (54%) | Symbols: RLK | receptor lectin kinase | chr2:15814934-15816961 REVERSE LENGTH=675