MLOC_68157 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.337799.574626.943476.1578
LEAShoots from the seedlings (10 cm shoot stage)3.487410.9423310.9617271.57137
INF1Young developing inflorescences (5mm)24.606824.046723.412616.4637
INF2Developing inflorescences (1-1.5 cm)15.317120.020516.281615.9909
ROORoots from the seedlings (10 cm shoot stage)1.601654.72973.448933.99552
NODDeveloping tillers at six leaf stage, 3rd internode0.2100740.1952210.3522660.657176
CAR5Developing grain, bracts removed (5 DPA)5.024584.792535.572334.05019
CAR15Developing grain, bracts removed (15 DPA)1.040070.6534950.3050411.4524



CDS Structure of MLOC_68157






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68157.5
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68157.5CUST_15208_PI427708080AvailableAvailablecontig_54289 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g54490.1 +3 0.0 1045 577/750 (77%) 13102.m06240 protein nucleotide binding protein, putative, expressed
TAIR PP10 AT4G21530.1 +3 0.0 660 353/701 (50%) Transducin/WD40 repeat-like superfamily protein | chr4:11450743-11455862 FORWARD LENGTH=777