MLOC_68145 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.040361.554821.652821.31829
LEAShoots from the seedlings (10 cm shoot stage)2.338681.276311.126131.29082
INF1Young developing inflorescences (5mm)2.122752.39343.041921.94285
INF2Developing inflorescences (1-1.5 cm)3.853973.621264.064193.80917
ROORoots from the seedlings (10 cm shoot stage)0.4252130.8661570.884350.859607
NODDeveloping tillers at six leaf stage, 3rd internode0.3646560.704610.8021592.11774
CAR5Developing grain, bracts removed (5 DPA)3.213163.164982.932742.70991
CAR15Developing grain, bracts removed (15 DPA)45.94742.311339.808792.8312



CDS Structure of MLOC_68145






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68145.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251098.1NoneNoneNoneNone
MLOC_68145.2CUST_18362_PI427708080AvailableAvailablecontig_54271 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g04490.1 -3 2e-46 183 100/197 (51%) 13102.m00470 protein histone acetyltransferase HAC1, putative, expressed
TAIR PP10 AT3G07200.2 -3 5e-19 88 44/91 (48%) RING/U-box superfamily protein | chr3:2291343-2292223 FORWARD LENGTH=182