- Predicted Gene MLOC_68145
MLOC_68145 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.04036 | 1.55482 | 1.65282 | 1.31829 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.33868 | 1.27631 | 1.12613 | 1.29082 |
INF1 | Young developing inflorescences (5mm) | 2.12275 | 2.3934 | 3.04192 | 1.94285 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.85397 | 3.62126 | 4.06419 | 3.80917 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.425213 | 0.866157 | 0.88435 | 0.859607 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.364656 | 0.70461 | 0.802159 | 2.11774 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.21316 | 3.16498 | 2.93274 | 2.70991 |
CAR15 | Developing grain, bracts removed (15 DPA) | 45.947 | 42.3113 | 39.8087 | 92.8312 |
CDS Structure of MLOC_68145
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_68145.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g04490.1 |
-3 |
2e-46 |
183 |
100/197 (51%) |
13102.m00470 protein histone acetyltransferase HAC1, putative, expressed |
TAIR PP10 |
AT3G07200.2 |
-3 |
5e-19 |
88 |
44/91 (48%) |
RING/U-box superfamily protein | chr3:2291343-2292223 FORWARD LENGTH=182 |