MLOC_68143 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains45.365633.133931.181840.4296
LEAShoots from the seedlings (10 cm shoot stage)29.968917.342524.063322.0672
INF1Young developing inflorescences (5mm)57.046658.545767.350860.1794
INF2Developing inflorescences (1-1.5 cm)82.17480.398586.0581105.192
ROORoots from the seedlings (10 cm shoot stage)43.700837.75340.792754.5917
NODDeveloping tillers at six leaf stage, 3rd internode27.701541.435438.6139145.145
CAR5Developing grain, bracts removed (5 DPA)39.635143.184539.815348.498
CAR15Developing grain, bracts removed (15 DPA)60.097157.884951.6808154.036



CDS Structure of MLOC_68143






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68143.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359107NoneNoneNoneNone
MLOC_68143.1CUST_5595_PI427708080AvailableAvailablecontig_54272 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g66420.1 +3 4e-127 372 217/250 (87%) 13101.m07189 protein PHD finger protein, putative, expressed
TAIR PP10 AT5G26210.1 +3 1e-100 303 170/253 (67%) | Symbols: AL4 | alfin-like 4 | chr5:9158566-9160221 REVERSE LENGTH=255