MLOC_68089 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.103882000.0954581
INF2Developing inflorescences (1-1.5 cm)0.2203310.2019380.130840.258419
ROORoots from the seedlings (10 cm shoot stage)00.07459050.1761110.203364
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)00.06064130.06284470.0835299
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_68089






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68089.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372510NoneNoneNoneNone
MLOC_68089.1CUST_5589_PI427708080AvailableAvailablecontig_54172 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g05720.2 +3 1e-33 120 50/85 (59%) 13110.m00493 protein LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
TAIR PP10 AT4G30880.1 +3 3e-13 64 30/73 (41%) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr4:15035229-15035750 FORWARD LENGTH=109