MLOC_68088 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.741225.900924.004821.1997
LEAShoots from the seedlings (10 cm shoot stage)42.829138.054936.544833.159
INF1Young developing inflorescences (5mm)41.589740.772741.628733.5471
INF2Developing inflorescences (1-1.5 cm)38.365544.307341.795544.2538
ROORoots from the seedlings (10 cm shoot stage)13.782823.138717.715425.1768
NODDeveloping tillers at six leaf stage, 3rd internode21.679930.352935.1836104.784
CAR5Developing grain, bracts removed (5 DPA)23.456423.361624.476122.3359
CAR15Developing grain, bracts removed (15 DPA)5.28164.092835.3394210.7378



CDS Structure of MLOC_68088






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68088.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370653NoneNoneNoneNone
MLOC_68088.1CUST_5588_PI427708080AvailableAvailablecontig_54172 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g34710.1 +2 0.0 1425 762/847 (90%) 13110.m03099 protein myosin-2 heavy chain, non muscle, putative, expressed
TAIR PP10 AT3G19960.1 +2 0.0 1089 575/847 (68%) | Symbols: ATM1 | myosin 1 | chr3:6949787-6956736 FORWARD LENGTH=1166