MLOC_68085 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.855216.943213.248415.8359
LEAShoots from the seedlings (10 cm shoot stage)5.694765.03163.581984.13964
INF1Young developing inflorescences (5mm)31.140431.858931.254226.5119
INF2Developing inflorescences (1-1.5 cm)22.380525.826925.497926.7486
ROORoots from the seedlings (10 cm shoot stage)6.0683113.953912.274915.1921
NODDeveloping tillers at six leaf stage, 3rd internode2.416533.265057.8361613.4866
CAR5Developing grain, bracts removed (5 DPA)14.227814.753114.621514.126
CAR15Developing grain, bracts removed (15 DPA)3.23813.160033.388437.44274



CDS Structure of MLOC_68085






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68085.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250026.1NoneNoneNoneNone
AK354805NoneNoneNoneNone
MLOC_68085.2CUST_5587_PI427708080AvailableAvailablecontig_54168 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g14040.1 +2 0.0 693 387/431 (90%) 13106.m01550 protein ThiF family domain containing protein, putative, expressed
TAIR PP10 AT5G37530.2 +2 0.0 561 302/391 (77%) NAD(P)-binding Rossmann-fold superfamily protein | chr5:14906505-14909020 FORWARD LENGTH=456