- Predicted Gene MLOC_68072
MLOC_68072 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 89.5938 | 51.1799 | 48.213 | 51.5422 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 35.6023 | 28.141 | 42.7198 | 24.9162 |
INF1 | Young developing inflorescences (5mm) | 46.8485 | 65.3027 | 58.6008 | 36.5632 |
INF2 | Developing inflorescences (1-1.5 cm) | 29.0497 | 36.4641 | 31.2977 | 30.1658 |
ROO | Roots from the seedlings (10 cm shoot stage) | 61.134 | 41.8579 | 46.3816 | 45.5324 |
NOD | Developing tillers at six leaf stage, 3rd internode | 38.0382 | 44.2031 | 43.1167 | 113.162 |
CAR5 | Developing grain, bracts removed (5 DPA) | 30.7823 | 35.9146 | 36.9722 | 27.82 |
CAR15 | Developing grain, bracts removed (15 DPA) | 12.7558 | 10.1861 | 7.33301 | 20.1114 |
CDS Structure of MLOC_68072
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_68072.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g21970.1 |
+3 |
2e-22 |
94 |
43/44 (98%) |
13102.m02462 protein 26S protease regulatory subunit 6B, putative, expressed |
TAIR PP10 |
AT5G58290.1 |
+3 |
2e-21 |
90 |
40/45 (89%) |
| Symbols: RPT3 | regulatory particle triple-A ATPase 3 | chr5:23569155-23571116 FORWARD LENGTH=408 |