MLOC_68056 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains35.555637.438941.788539.9531
LEAShoots from the seedlings (10 cm shoot stage)35.971430.026840.727631.6941
INF1Young developing inflorescences (5mm)19.489516.900317.380115.547
INF2Developing inflorescences (1-1.5 cm)12.795816.288614.363516.4255
ROORoots from the seedlings (10 cm shoot stage)30.055529.374723.063136.1775
NODDeveloping tillers at six leaf stage, 3rd internode58.66875.482897.1282266.933
CAR5Developing grain, bracts removed (5 DPA)29.250626.863625.934327.2386
CAR15Developing grain, bracts removed (15 DPA)9.9794310.7188.9594323.6274



CDS Structure of MLOC_68056






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68056.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68056.2CUST_17804_PI427708080AvailableAvailablecontig_54117 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g38620.1 -3 0.0 1061 545/622 (88%) 13109.m03850 protein NADPH reductase, putative, expressed
TAIR PP10 AT4G30210.2 -3 0.0 909 458/620 (74%) | Symbols: ATR2, AR2 | P450 reductase 2 | chr4:14796900-14800578 FORWARD LENGTH=711