MLOC_68051 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.68067.620316.824299.35221
LEAShoots from the seedlings (10 cm shoot stage)2.115220.9443351.176241.164
INF1Young developing inflorescences (5mm)10.03229.121738.028518.14177
INF2Developing inflorescences (1-1.5 cm)5.189517.222254.740196.86295
ROORoots from the seedlings (10 cm shoot stage)5.154135.832695.936326.69006
NODDeveloping tillers at six leaf stage, 3rd internode0.6469240.6059590.7697121.90274
CAR5Developing grain, bracts removed (5 DPA)5.659636.402166.131536.26568
CAR15Developing grain, bracts removed (15 DPA)0.232080.1686150.4626290.6786



CDS Structure of MLOC_68051






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68051.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68051.1CUST_15197_PI427708080AvailableAvailablecontig_54113 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g28120.1 -3 0.0 573 285/344 (83%) 13109.m02770 protein OsFBX330 - F-box domain containing protein, expressed
TAIR PP10 AT1G10780.1 -3 7e-121 362 192/346 (55%) F-box/RNI-like superfamily protein | chr1:3592875-3594310 REVERSE LENGTH=418