- Predicted Gene MLOC_68051
MLOC_68051 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 14.6806 | 7.62031 | 6.82429 | 9.35221 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.11522 | 0.944335 | 1.17624 | 1.164 |
INF1 | Young developing inflorescences (5mm) | 10.0322 | 9.12173 | 8.02851 | 8.14177 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.18951 | 7.22225 | 4.74019 | 6.86295 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.15413 | 5.83269 | 5.93632 | 6.69006 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.646924 | 0.605959 | 0.769712 | 1.90274 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.65963 | 6.40216 | 6.13153 | 6.26568 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.23208 | 0.168615 | 0.462629 | 0.6786 |
CDS Structure of MLOC_68051
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_68051.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g28120.1 |
-3 |
0.0 |
573 |
285/344 (83%) |
13109.m02770 protein OsFBX330 - F-box domain containing protein, expressed |
TAIR PP10 |
AT1G10780.1 |
-3 |
7e-121 |
362 |
192/346 (55%) |
F-box/RNI-like superfamily protein | chr1:3592875-3594310 REVERSE LENGTH=418 |