MLOC_68034 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.266111.852116.99813.0997
LEAShoots from the seedlings (10 cm shoot stage)31.710953.279842.685530.241
INF1Young developing inflorescences (5mm)4.616045.159655.239593.96366
INF2Developing inflorescences (1-1.5 cm)5.245143.371534.236294.32232
ROORoots from the seedlings (10 cm shoot stage)28.741423.955439.337826.5164
NODDeveloping tillers at six leaf stage, 3rd internode18.094110.392321.065129.9127
CAR5Developing grain, bracts removed (5 DPA)7.322677.198517.638216.60617
CAR15Developing grain, bracts removed (15 DPA)1.221211.403251.437473.09783



CDS Structure of MLOC_68034






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68034.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68034.2CUST_13031_PI427708083AvailableAvailablecontig_54087 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g40080.1 +1 5e-34 133 62/68 (91%) 13106.m04166 protein heme oxygenase 1, putative, expressed
TAIR PP10 AT1G69720.2 +1 9e-24 101 51/72 (71%) | Symbols: HO3 | heme oxygenase 3 | chr1:26227178-26228164 FORWARD LENGTH=227