MLOC_6801 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.0430803 | 0.153207 | 0 | 0.155773 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.0707981 | 0 | 0.0541239 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0.0339987 | 0 | 0.035884 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0642218 | 0 | 0 | 0.0803951 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.0832308 | 0.0466966 | 0 | 0.092158 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0234729 | 0 | 0.0100358 | 0.0125964 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0 | 0 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 254.616 | 349.115 | 163.61 | 686.18 |
CDS Structure of MLOC_6801
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6801.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g51060.1 |
+3 |
1e-141 |
414 |
187/249 (75%) |
13106.m05495 protein CHIT8 - Chitinase family protein precursor, expressed |
| TAIR PP10 |
AT3G12500.1 |
+3 |
3e-139 |
406 |
184/243 (76%) |
| Symbols: ATHCHIB, PR3, PR-3, CHI-B, B-CHI, HCHIB | basic chitinase | chr3:3962501-3963984 REVERSE LENGTH=335 |
