MLOC_68002 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.034862.748492.559953.07937
LEAShoots from the seedlings (10 cm shoot stage)3.779494.162583.432013.54283
INF1Young developing inflorescences (5mm)4.459965.642664.223324.71666
INF2Developing inflorescences (1-1.5 cm)5.679755.040985.585396.61164
ROORoots from the seedlings (10 cm shoot stage)3.238684.165883.596885.6013
NODDeveloping tillers at six leaf stage, 3rd internode0.9981151.304612.164815.43218
CAR5Developing grain, bracts removed (5 DPA)5.812575.864916.12336.66351
CAR15Developing grain, bracts removed (15 DPA)3.111042.751572.332447.28793



CDS Structure of MLOC_68002






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68002.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360151NoneNoneNoneNone
MLOC_68002.1CUST_5579_PI427708080AvailableAvailablecontig_54046 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g57050.1 -3 0.0 646 394/473 (83%) 13102.m06562 protein diphthamide biosynthesis protein, putative, expressed
TAIR PP10 AT5G62030.1 -3 3e-126 383 224/435 (51%) diphthamide synthesis DPH2 family protein | chr5:24919046-24920407 FORWARD LENGTH=453