- Predicted Gene MLOC_68001
MLOC_68001 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_68001_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_68001_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 150.427 | 123.667 | 121.975 | 137.555 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 86.0887 | 77.8805 | 62.8467 | 65.0208 |
INF1 | Young developing inflorescences (5mm) | 144.096 | 155.17 | 147.606 | 134.841 |
INF2 | Developing inflorescences (1-1.5 cm) | 124.049 | 133.861 | 136.466 | 152.007 |
ROO | Roots from the seedlings (10 cm shoot stage) | 86.0013 | 85.3104 | 81.415 | 104.342 |
NOD | Developing tillers at six leaf stage, 3rd internode | 73.727 | 84.7484 | 96.2722 | 300.414 |
CAR5 | Developing grain, bracts removed (5 DPA) | 176.768 | 198.281 | 195.873 | 196.793 |
CAR15 | Developing grain, bracts removed (15 DPA) | 31.5361 | 32.1894 | 31.8926 | 79.3884 |
CDS Structure of MLOC_68001
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_68001.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g57040.1 |
+2 |
0.0 |
723 |
352/380 (93%) |
13102.m06560 protein dehydrogenase, putative, expressed |
TAIR PP10 |
AT5G43940.1 |
+2 |
0.0 |
688 |
338/374 (90%) |
| Symbols: HOT5, ADH2, GSNOR, ATGSNOR1, PAR2 | GroES-like zinc-binding dehydrogenase family protein | chr5:17684265-17686379 FORWARD LENGTH=379 |