MLOC_680 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.586312.635512.81426.89179
LEAShoots from the seedlings (10 cm shoot stage)10.74516.18888.054877.20136
INF1Young developing inflorescences (5mm)31.885331.040127.094918.1263
INF2Developing inflorescences (1-1.5 cm)37.999436.653836.873530.23
ROORoots from the seedlings (10 cm shoot stage)4.538689.4943510.00977.15417
NODDeveloping tillers at six leaf stage, 3rd internode4.516573.757382.980398.92783
CAR5Developing grain, bracts removed (5 DPA)22.09714.793917.887912.79
CAR15Developing grain, bracts removed (15 DPA)11.81187.960428.0716916.005



CDS Structure of MLOC_680






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_680.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_680.2CUST_13029_PI427708083AvailableAvailablecontig_105 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g27090.1 -3 2e-41 155 85/121 (70%) 13112.m02754 protein expressed protein
TAIR PP10None-----