MLOC_680 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_680_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 3.5863 | 12.6355 | 12.8142 | 6.89179 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 10.745 | 16.1888 | 8.05487 | 7.20136 |
INF1 | Young developing inflorescences (5mm) | 31.8853 | 31.0401 | 27.0949 | 18.1263 |
INF2 | Developing inflorescences (1-1.5 cm) | 37.9994 | 36.6538 | 36.8735 | 30.23 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.53868 | 9.49435 | 10.0097 | 7.15417 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.51657 | 3.75738 | 2.98039 | 8.92783 |
CAR5 | Developing grain, bracts removed (5 DPA) | 22.097 | 14.7939 | 17.8879 | 12.79 |
CAR15 | Developing grain, bracts removed (15 DPA) | 11.8118 | 7.96042 | 8.07169 | 16.005 |
CDS Structure of MLOC_680
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_680.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g27090.1 |
-3 |
2e-41 |
155 |
85/121 (70%) |
13112.m02754 protein expressed protein |
TAIR PP10 | None | - | - | - | - | - |