MLOC_68 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.77218 | 6.7001 | 5.82375 | 7.04459 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.64412 | 4.90688 | 3.42674 | 3.92623 |
| INF1 | Young developing inflorescences (5mm) | 5.11041 | 5.96812 | 5.78632 | 4.93656 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.21228 | 3.18412 | 3.46503 | 4.09694 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 13.1568 | 12.0391 | 12.3059 | 16.3114 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 18.3973 | 18.84 | 22.776 | 67.9993 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 16.2404 | 15.2206 | 17.4618 | 16.5762 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.44931 | 5.94337 | 5.11283 | 12.4243 |
CDS Structure of MLOC_68
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_68.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g48964.1 |
-3 |
0.0 |
660 |
310/385 (81%) |
13102.m05542 protein WD-40 repeat family protein, putative, expressed |
| TAIR PP10 |
AT3G13340.2 |
-3 |
0.0 |
565 |
261/379 (69%) |
Transducin/WD40 repeat-like superfamily protein | chr3:4332370-4334603 FORWARD LENGTH=447 |
