MLOC_67992 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1529031.428170.6328710.667004
LEAShoots from the seedlings (10 cm shoot stage)64.860184.209149.693845.2949
INF1Young developing inflorescences (5mm)0.1426830.2744541.063170.269447
INF2Developing inflorescences (1-1.5 cm)0.4100630.47983100.532379
ROORoots from the seedlings (10 cm shoot stage)0.2498451.530920.9689351.13688
NODDeveloping tillers at six leaf stage, 3rd internode0.1306330.7109680.3414021.70625
CAR5Developing grain, bracts removed (5 DPA)0.7529460.3352061.306080.593579
CAR15Developing grain, bracts removed (15 DPA)1.049812.144091.786662.59859



CDS Structure of MLOC_67992






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67992.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67992.1CUST_15188_PI427708080AvailableAvailablecontig_54028 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g38229.1 -3 6e-25 104 48/50 (96%) 13110.m07791 protein photosystem I P700 chlorophyll a apoprotein A1, putative
TAIR PP10 ATCG00350.1 -3 2e-24 101 46/50 (92%) | Symbols: PSAA | Photosystem I, PsaA/PsaB protein | chrC:39605-41857 REVERSE LENGTH=750