MLOC_67983 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.392953.336184.623283.75876
LEAShoots from the seedlings (10 cm shoot stage)2.682671.174842.142341.55706
INF1Young developing inflorescences (5mm)14.068218.389518.629214.2882
INF2Developing inflorescences (1-1.5 cm)10.070611.201810.132411.4648
ROORoots from the seedlings (10 cm shoot stage)5.676944.830145.729155.44246
NODDeveloping tillers at six leaf stage, 3rd internode0.2672390.5962752.204642.3809
CAR5Developing grain, bracts removed (5 DPA)3.595383.843263.282963.54406
CAR15Developing grain, bracts removed (15 DPA)1.000530.6839570.580851.88741



CDS Structure of MLOC_67983






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67983.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67983.1CUST_15186_PI427708080AvailableAvailablecontig_54012 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g65560.1 -3 4e-70 219 109/143 (76%) 13101.m07085 protein snRK1-interacting protein 1, putative, expressed
TAIR PP10 AT1G71310.3 -3 7e-39 137 66/105 (63%) cobalt ion binding | chr1:26879179-26879844 REVERSE LENGTH=165