MLOC_67965 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.841589.624129.670487.70991
LEAShoots from the seedlings (10 cm shoot stage)7.075785.09574.41614.4243
INF1Young developing inflorescences (5mm)10.811211.79229.937598.7627
INF2Developing inflorescences (1-1.5 cm)10.703311.847711.061711.8291
ROORoots from the seedlings (10 cm shoot stage)8.0558711.518716.415512.3768
NODDeveloping tillers at six leaf stage, 3rd internode15.10157.0060610.699622.2403
CAR5Developing grain, bracts removed (5 DPA)20.954720.377721.039619.1865
CAR15Developing grain, bracts removed (15 DPA)407.16357.249364.227846.183



CDS Structure of MLOC_67965






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67965.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67965.2NoneAvailableAvailablecontig_53987 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g03660.4 +3 8e-112 366 201/264 (76%) 13103.m00358 protein CAMK_CAMK_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
TAIR PP10 AT2G17290.1 +3 2e-71 251 129/187 (69%) | Symbols: CPK6, ATCDPK3, ATCPK6 | Calcium-dependent protein kinase family protein | chr2:7517005-7519239 FORWARD LENGTH=544