MLOC_67954 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.513882.503854.560893.14103
LEAShoots from the seedlings (10 cm shoot stage)0.8615460.9330312.935181.25659
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.048610600.03024980.0582086
ROORoots from the seedlings (10 cm shoot stage)26.637832.279321.24432.0696
NODDeveloping tillers at six leaf stage, 3rd internode0.02193760.06356620.04406680.160503
CAR5Developing grain, bracts removed (5 DPA)0.1502020.08558610.0900310.103206
CAR15Developing grain, bracts removed (15 DPA)1.098310.8384770.7236872.20756



CDS Structure of MLOC_67954






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67954.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252100.1NoneNoneNoneNone
MLOC_67954.1CUST_5574_PI427708080AvailableAvailablecontig_53958 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g44780.1 +2 2e-133 399 212/354 (60%) 13107.m04714 protein GDSL-like lipase/acylhydrolase, putative, expressed
TAIR PP10 AT1G28570.1 +2 1e-73 243 149/354 (42%) SGNH hydrolase-type esterase superfamily protein | chr1:10041838-10044112 REVERSE LENGTH=389