MLOC_67949 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1610830.1366740.1387860.144368
LEAShoots from the seedlings (10 cm shoot stage)0.1868770.02799260.0859820.0855862
INF1Young developing inflorescences (5mm)0.4805850.6591610.4479990.500575
INF2Developing inflorescences (1-1.5 cm)0.5910740.7732960.6340270.796177
ROORoots from the seedlings (10 cm shoot stage)0.8837320.6651970.5194490.737732
NODDeveloping tillers at six leaf stage, 3rd internode0.2132220.2457681.323231.35386
CAR5Developing grain, bracts removed (5 DPA)20.420220.749623.324322.1942
CAR15Developing grain, bracts removed (15 DPA)0.7963320.7150750.6454331.90995



CDS Structure of MLOC_67949






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67949.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67949.1CUST_15181_PI427708080AvailableAvailablecontig_53954 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g15320.1 -3 0.0 894 456/540 (84%) 13103.m01794 protein glyoxal oxidase-related, putative, expressed
TAIR PP10 AT1G75620.1 -3 0.0 587 308/540 (57%) glyoxal oxidase-related protein | chr1:28394951-28396594 REVERSE LENGTH=547