MLOC_67933 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2143620.2000150.1230110.201703
LEAShoots from the seedlings (10 cm shoot stage)8.9866118.132614.048311.8851
INF1Young developing inflorescences (5mm)0.07769030.06420630.0503520.0615816
INF2Developing inflorescences (1-1.5 cm)0.02352550.06829560.06732210.0681041
ROORoots from the seedlings (10 cm shoot stage)0.05167440.0252520.2967190.0775808
NODDeveloping tillers at six leaf stage, 3rd internode8.066775.8944817.595923.7986
CAR5Developing grain, bracts removed (5 DPA)1.815052.468862.265742.54324
CAR15Developing grain, bracts removed (15 DPA)0.5571130.6076470.5207621.5484



CDS Structure of MLOC_67933






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67933.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354631NoneNoneNoneNone
MLOC_67933.1CUST_5569_PI427708080AvailableAvailablecontig_53920 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g38090.1 +2 0.0 1008 629/895 (70%) 13109.m03789 protein expressed protein
TAIR PP10 AT1G42550.1 +2 6e-173 542 386/894 (43%) | Symbols: PMI1 | plastid movement impaired1 | chr1:15977131-15979734 FORWARD LENGTH=843