- Predicted Gene MLOC_67931
MLOC_67931 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 51.7861 | 42.4965 | 43.7483 | 55.3364 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 24.5386 | 23.8061 | 27.5814 | 25.7708 |
| INF1 | Young developing inflorescences (5mm) | 13.4295 | 13.9879 | 13.1463 | 13.8117 |
| INF2 | Developing inflorescences (1-1.5 cm) | 9.22019 | 9.16366 | 12.2014 | 13.1747 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 43.1952 | 42.9774 | 49.4618 | 66.5958 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 56.3 | 40.688 | 29.5077 | 150.191 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 21.681 | 28.5189 | 24.4611 | 30.8421 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.3472 | 7.5649 | 8.92089 | 21.7811 |
CDS Structure of MLOC_67931
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_67931.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g38080.1 |
+2 |
1e-66 |
209 |
108/133 (81%) |
13109.m03788 protein retrotransposon protein, putative, unclassified, expressed |
| TAIR PP10 |
AT2G44360.1 |
+2 |
2e-49 |
160 |
79/119 (66%) |
unknown protein; Has 23 Blast hits to 23 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:18320855-18321584 REVERSE LENGTH=135 |