MLOC_67930 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2533920.073584200.1678
LEAShoots from the seedlings (10 cm shoot stage)01.349881.769371.41349
INF1Young developing inflorescences (5mm)00.2140320.1744480.21068
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)4.902450.8853960.4721981.819
NODDeveloping tillers at six leaf stage, 3rd internode0.0609797000.00904886
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_67930






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67930.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67930.1CUST_9145_PI427708083AvailableAvailablecontig_53919 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g04540.1 +2 4e-81 256 130/154 (84%) 13108.m00435 protein decarboxylase, putative, expressed
TAIR PP10 AT2G20340.1 +2 9e-37 136 66/150 (44%) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr2:8779804-8782490 FORWARD LENGTH=490