MLOC_67910 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.521186.945196.021567.20021
LEAShoots from the seedlings (10 cm shoot stage)2.601230.9008511.357331.4409
INF1Young developing inflorescences (5mm)11.285413.997614.410111.9358
INF2Developing inflorescences (1-1.5 cm)11.783414.468711.325114.9925
ROORoots from the seedlings (10 cm shoot stage)6.141246.545355.680698.25371
NODDeveloping tillers at six leaf stage, 3rd internode1.055161.185351.309594.0487
CAR5Developing grain, bracts removed (5 DPA)7.016188.052846.758837.84216
CAR15Developing grain, bracts removed (15 DPA)2.467541.810181.955295.37215



CDS Structure of MLOC_67910






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67910.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364680NoneNoneNoneNone
MLOC_67910.1CUST_5566_PI427708080AvailableAvailablecontig_53891 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g40790.1 -2 1e-138 417 251/381 (66%) 13112.m04245 protein zinc finger family protein, putative, expressed
TAIR PP10 AT2G30580.1 -2 3e-78 259 171/422 (41%) | Symbols: DRIP2 | DREB2A-interacting protein 2 | chr2:13026444-13030363 FORWARD LENGTH=420