MLOC_6791 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains34.851531.993930.800729.395
LEAShoots from the seedlings (10 cm shoot stage)18.590519.585420.673114.4115
INF1Young developing inflorescences (5mm)2.384162.562062.416041.88455
INF2Developing inflorescences (1-1.5 cm)3.055552.93252.818022.88186
ROORoots from the seedlings (10 cm shoot stage)45.109736.015830.300636.2303
NODDeveloping tillers at six leaf stage, 3rd internode30.149516.638924.670447.992
CAR5Developing grain, bracts removed (5 DPA)4.279084.296824.798713.70121
CAR15Developing grain, bracts removed (15 DPA)1.820411.909491.452683.7577



CDS Structure of MLOC_6791






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_6791.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_6791.2CUST_15173_PI427708080AvailableAvailablecontig_138102 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g06260.1 -2 8e-105 315 180/212 (85%) 13112.m00638 protein harpin-induced protein 1 domain containing protein, expressed
TAIR PP10 AT3G44220.1 -2 1e-47 165 85/165 (52%) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr3:15928216-15929645 FORWARD LENGTH=206