MLOC_6791 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_6791_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 34.8515 | 31.9939 | 30.8007 | 29.395 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 18.5905 | 19.5854 | 20.6731 | 14.4115 |
INF1 | Young developing inflorescences (5mm) | 2.38416 | 2.56206 | 2.41604 | 1.88455 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.05555 | 2.9325 | 2.81802 | 2.88186 |
ROO | Roots from the seedlings (10 cm shoot stage) | 45.1097 | 36.0158 | 30.3006 | 36.2303 |
NOD | Developing tillers at six leaf stage, 3rd internode | 30.1495 | 16.6389 | 24.6704 | 47.992 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.27908 | 4.29682 | 4.79871 | 3.70121 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.82041 | 1.90949 | 1.45268 | 3.7577 |
CDS Structure of MLOC_6791
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6791.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g06260.1 |
-2 |
8e-105 |
315 |
180/212 (85%) |
13112.m00638 protein harpin-induced protein 1 domain containing protein, expressed |
TAIR PP10 |
AT3G44220.1 |
-2 |
1e-47 |
165 |
85/165 (52%) |
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr3:15928216-15929645 FORWARD LENGTH=206 |