MLOC_67906 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.02870200.0580081
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)000.02472410.0247915
INF2Developing inflorescences (1-1.5 cm)0.065599900.2721320.171211
ROORoots from the seedlings (10 cm shoot stage)0.0655921000.0225863
NODDeveloping tillers at six leaf stage, 3rd internode0.03299960.0056485900.0104427
CAR5Developing grain, bracts removed (5 DPA)0.275670.5853490.4481270.49515
CAR15Developing grain, bracts removed (15 DPA)0.8582290.7877050.7091012.13142



CDS Structure of MLOC_67906






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67906.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372533NoneNoneNoneNone
MLOC_67906.1CUST_5565_PI427708080AvailableAvailablecontig_53886 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g05300.1 +2 3e-112 348 242/480 (50%) 13106.m00510 protein transferase family protein, putative, expressed
TAIR PP10 AT5G39050.1 +2 1e-19 92 126/490 (26%) HXXXD-type acyl-transferase family protein | chr5:15634596-15636005 FORWARD LENGTH=469