MLOC_67900 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.692112.253852.129651.75656
LEAShoots from the seedlings (10 cm shoot stage)2.064771.792021.553491.36275
INF1Young developing inflorescences (5mm)3.442893.391433.954562.48089
INF2Developing inflorescences (1-1.5 cm)5.566964.929385.69654.96558
ROORoots from the seedlings (10 cm shoot stage)1.201061.684212.283561.66161
NODDeveloping tillers at six leaf stage, 3rd internode1.106931.137351.072663.34111
CAR5Developing grain, bracts removed (5 DPA)4.118414.141524.025953.31106
CAR15Developing grain, bracts removed (15 DPA)2.633652.37992.276954.67731



CDS Structure of MLOC_67900






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67900.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369192NoneNoneNoneNone
MLOC_67900.2NoneAvailableAvailablecontig_53872 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g28510.4 +1 0.0 295 163/255 (64%) 13105.m02937 protein importin subunit beta, putative, expressed
TAIR PP10 AT3G08943.1 +1 6e-149 226 128/256 (50%) ARM repeat superfamily protein | chr3:2719198-2721911 REVERSE LENGTH=871