MLOC_67874 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.509153.695833.183863.85444
LEAShoots from the seedlings (10 cm shoot stage)1.178871.934861.928921.16797
INF1Young developing inflorescences (5mm)0.0545370.0335030.03472360.0362235
INF2Developing inflorescences (1-1.5 cm)0.5732680.949580.8938320.91524
ROORoots from the seedlings (10 cm shoot stage)15.211610.537210.767710.9756
NODDeveloping tillers at six leaf stage, 3rd internode8.4915812.463113.918327.9081
CAR5Developing grain, bracts removed (5 DPA)2.785092.524142.68312.73596
CAR15Developing grain, bracts removed (15 DPA)0.4988720.656110.4792071.49574



CDS Structure of MLOC_67874






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67874.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376409NoneNoneNoneNone
MLOC_67874.1CUST_5554_PI427708080AvailableAvailablecontig_53805 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g09590.1 -2 9e-80 252 157/280 (56%) 13101.m01025 protein myb-like DNA-binding domain containing protein, putative, expressed
TAIR PP10 AT2G36890.1 -2 1e-58 197 84/118 (71%) | Symbols: RAX2, MYB38, ATMYB38, BIT1 | Duplicated homeodomain-like superfamily protein | chr2:15485821-15487245 FORWARD LENGTH=298