MLOC_6787 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 16.1942 | 9.95705 | 11.2477 | 15.6013 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 92.4729 | 12.311 | 6.23308 | 44.7024 |
| INF1 | Young developing inflorescences (5mm) | 6.30512 | 8.40774 | 7.00574 | 7.80565 |
| INF2 | Developing inflorescences (1-1.5 cm) | 11.0797 | 11.6017 | 12.3436 | 16.294 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 178.794 | 32.9165 | 25.5949 | 89.0179 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.97571 | 8.00096 | 5.14653 | 32.8787 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 18.514 | 15.3572 | 10.6359 | 23.0235 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 40.4721 | 43.3623 | 34.9882 | 139.231 |
CDS Structure of MLOC_6787
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6787.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g15960.1 |
+2 |
3e-61 |
199 |
108/117 (92%) |
13103.m01885 protein hsp20/alpha crystallin family protein, putative, expressed |
| TAIR PP10 |
AT3G46230.1 |
+2 |
4e-52 |
174 |
93/117 (79%) |
| Symbols: ATHSP17.4, HSP17.4 | heat shock protein 17.4 | chr3:16984263-16984733 REVERSE LENGTH=156 |
