MLOC_67856 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.139766.266127.829677.02764
LEAShoots from the seedlings (10 cm shoot stage)2.782172.400274.253762.44756
INF1Young developing inflorescences (5mm)0.5042730.8820470.4833480.573001
INF2Developing inflorescences (1-1.5 cm)0.3928110.1191340.3012940.27854
ROORoots from the seedlings (10 cm shoot stage)7.286563.315515.012134.66436
NODDeveloping tillers at six leaf stage, 3rd internode53.757957.954222.2537150.548
CAR5Developing grain, bracts removed (5 DPA)17.211118.788320.591519.2381
CAR15Developing grain, bracts removed (15 DPA)3.190994.623285.1447911.0261



CDS Structure of MLOC_67856






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67856.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365178NoneNoneNoneNone
MLOC_67856.1CUST_5552_PI427708080AvailableAvailablecontig_53788 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g65660.1 +3 0.0 760 406/458 (89%) 13101.m07097 protein amino acid transporter, putative, expressed
TAIR PP10 AT5G49630.1 +3 5e-159 467 243/455 (53%) | Symbols: AAP6 | amino acid permease 6 | chr5:20142681-20146441 REVERSE LENGTH=481