MLOC_67852 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4194670.5604190.4580450.481992
LEAShoots from the seedlings (10 cm shoot stage)0.2879870.1680410.1974390.189009
INF1Young developing inflorescences (5mm)1.522361.661731.459331.24962
INF2Developing inflorescences (1-1.5 cm)1.174811.394241.465771.37183
ROORoots from the seedlings (10 cm shoot stage)0.1737410.3392650.3579780.362901
NODDeveloping tillers at six leaf stage, 3rd internode0.01594130.04966850.06669440.162946
CAR5Developing grain, bracts removed (5 DPA)0.6067990.4777070.7203390.53487
CAR15Developing grain, bracts removed (15 DPA)0.4230820.4708690.1616460.853974



CDS Structure of MLOC_67852






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67852.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374956NoneNoneNoneNone
MLOC_67852.2CUST_18358_PI427708080AvailableAvailablecontig_53572 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g08140.1 +2 0.0 910 499/586 (85%) 13112.m00858 protein pentatricopeptide, putative, expressed
TAIR PP10 AT2G33760.1 +2 0.0 591 312/568 (55%) Pentatricopeptide repeat (PPR) superfamily protein | chr2:14275800-14277551 FORWARD LENGTH=583