MLOC_67798 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.428351.36171.584411.26963
LEAShoots from the seedlings (10 cm shoot stage)1.305210.2506860.5068540.524295
INF1Young developing inflorescences (5mm)0.1962320.1888970.0720090.133153
INF2Developing inflorescences (1-1.5 cm)0.7425890.8132541.103220.899752
ROORoots from the seedlings (10 cm shoot stage)2.863660.4924440.5399980.747057
NODDeveloping tillers at six leaf stage, 3rd internode4.469862.572640.4650644.40904
CAR5Developing grain, bracts removed (5 DPA)0.4933020.4739480.7743890.5293
CAR15Developing grain, bracts removed (15 DPA)0.3979780.2093630.2211370.69066



CDS Structure of MLOC_67798






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67798.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67798.1CUST_15156_PI427708080AvailableAvailablecontig_53642 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g35600.1 -3 0.0 679 430/542 (79%) 13109.m03484 protein MATE domain containing protein, expressed
TAIR PP10 AT4G23030.1 -3 3e-144 435 266/465 (57%) MATE efflux family protein | chr4:12072857-12074365 FORWARD LENGTH=502